Index

A

abstract_text (pubmed_client.PubMedArticle attribute) address (pubmed_client.Affiliation attribute) (pubmed_client.PmcAffiliation attribute) Affiliation (class in pubmed_client) affiliations() (pubmed_client.Author method) (pubmed_client.PmcAuthor method) alt_text (pubmed_client.Figure attribute) and_() (pubmed_client.SearchQuery method) article_type() (pubmed_client.SearchQuery method) article_types() (pubmed_client.PubMedArticle method) (pubmed_client.SearchQuery method)

ArticleSection (class in pubmed_client) ArticleSummary (class in pubmed_client) Author (class in pubmed_client) author_count (pubmed_client.PubMedArticle attribute) author_name (pubmed_client.CitationMatch attribute), [1] (pubmed_client.CitationQuery attribute) authors (pubmed_client.ArticleSummary attribute) authors() (pubmed_client.PmcFullText method) (pubmed_client.PubMedArticle method)

B

build (pubmed_client.DatabaseInfo attribute)

build() (pubmed_client.SearchQuery method)

C

caption (pubmed_client.Figure attribute) (pubmed_client.Table attribute) check_pmc_availability() (pubmed_client.PmcClient method) citation (pubmed_client.OaSubsetInfo attribute) CitationMatch (class in pubmed_client) CitationMatches (class in pubmed_client) CitationQuery (class in pubmed_client) Citations (class in pubmed_client) citing_pmids (pubmed_client.Citations attribute)

Client (class in pubmed_client) ClientConfig (class in pubmed_client) content (pubmed_client.ArticleSection attribute) corrected_query (pubmed_client.SpellCheckResult attribute), [1] count (pubmed_client.DatabaseCount attribute), [1] (pubmed_client.DatabaseInfo attribute) count_for() (pubmed_client.GlobalQueryResults method) country (pubmed_client.Affiliation attribute) (pubmed_client.PmcAffiliation attribute)

D

database (pubmed_client.SpellCheckResult attribute), [1] DatabaseCount (class in pubmed_client) DatabaseInfo (class in pubmed_client) db_name (pubmed_client.DatabaseCount attribute), [1] department (pubmed_client.Affiliation attribute) (pubmed_client.PmcAffiliation attribute) description (pubmed_client.DatabaseInfo attribute)

dimensions (pubmed_client.ExtractedFigure attribute) doi (pubmed_client.ArticleSummary attribute) (pubmed_client.PmcFullText attribute) (pubmed_client.PubMedArticle attribute) (pubmed_client.Reference attribute) download_and_extract_tar() (pubmed_client.PmcClient method) download_format (pubmed_client.OaSubsetInfo attribute) download_link (pubmed_client.OaSubsetInfo attribute)

E

email (pubmed_client.Affiliation attribute) (pubmed_client.Author attribute) (pubmed_client.PmcAuthor attribute) epost() (pubmed_client.PubMedClient method) EPostResult (class in pubmed_client) epub_date (pubmed_client.ArticleSummary attribute)

error_code (pubmed_client.OaSubsetInfo attribute) error_message (pubmed_client.OaSubsetInfo attribute) essn (pubmed_client.ArticleSummary attribute) exclude() (pubmed_client.SearchQuery method) extract_figures_with_captions() (pubmed_client.PmcClient method) extracted_file_path (pubmed_client.ExtractedFigure attribute) ExtractedFigure (class in pubmed_client)

F

fetch_all_by_pmids() (pubmed_client.PubMedClient method) fetch_article() (pubmed_client.PubMedClient method) fetch_articles() (pubmed_client.PubMedClient method) fetch_full_text() (pubmed_client.PmcClient method) fetch_summaries() (pubmed_client.PubMedClient method) fig_type (pubmed_client.Figure attribute) Figure (class in pubmed_client) figure (pubmed_client.ExtractedFigure attribute) figures() (pubmed_client.PmcFullText method)

file_size (pubmed_client.ExtractedFigure attribute) first_page (pubmed_client.CitationMatch attribute), [1] (pubmed_client.CitationQuery attribute) found_count() (pubmed_client.CitationMatches method) free_full_text_only() (pubmed_client.SearchQuery method) full_journal_name (pubmed_client.ArticleSummary attribute) full_name (pubmed_client.Author attribute) (pubmed_client.PmcAuthor attribute) full_text_only() (pubmed_client.SearchQuery method)

G

get_citations() (pubmed_client.Client method) (pubmed_client.PubMedClient method) get_database_info() (pubmed_client.Client method) (pubmed_client.PubMedClient method) get_database_list() (pubmed_client.Client method) (pubmed_client.PubMedClient method) get_limit() (pubmed_client.SearchQuery method) get_pmc_links() (pubmed_client.Client method) (pubmed_client.PubMedClient method)

get_related_articles() (pubmed_client.Client method) (pubmed_client.PubMedClient method) given_names (pubmed_client.Author attribute) (pubmed_client.PmcAuthor attribute) global_query() (pubmed_client.PubMedClient method) GlobalQueryResults (class in pubmed_client) graphic_href (pubmed_client.Figure attribute) group() (pubmed_client.SearchQuery method)

H

has_corrections (pubmed_client.SpellCheckResult attribute), [1]

I

id (pubmed_client.Figure attribute) (pubmed_client.PmcAffiliation attribute) (pubmed_client.Reference attribute) (pubmed_client.Table attribute) initials (pubmed_client.Author attribute) institution (pubmed_client.Affiliation attribute) (pubmed_client.PmcAffiliation attribute)

is_corresponding (pubmed_client.Author attribute) (pubmed_client.PmcAuthor attribute) is_oa_subset (pubmed_client.OaSubsetInfo attribute) is_oa_subset() (pubmed_client.PmcClient method) issn (pubmed_client.ArticleSummary attribute) (pubmed_client.PubMedArticle attribute) issue (pubmed_client.ArticleSummary attribute) (pubmed_client.PubMedArticle attribute)

J

journal (pubmed_client.ArticleSummary attribute) (pubmed_client.CitationMatch attribute), [1] (pubmed_client.CitationQuery attribute) (pubmed_client.PubMedArticle attribute)

journal_abbreviation (pubmed_client.PubMedArticle attribute)

K

key (pubmed_client.CitationMatch attribute), [1] (pubmed_client.CitationQuery attribute)

keywords() (pubmed_client.PubMedArticle method)

L

label (pubmed_client.Figure attribute) (pubmed_client.Table attribute) language (pubmed_client.PubMedArticle attribute) languages (pubmed_client.ArticleSummary attribute)

last_update (pubmed_client.DatabaseInfo attribute) license (pubmed_client.OaSubsetInfo attribute) limit() (pubmed_client.SearchQuery method) link_type (pubmed_client.RelatedArticles attribute)

M

match_citations() (pubmed_client.PubMedClient method) matches (pubmed_client.CitationMatches attribute), [1] menu_name (pubmed_client.DatabaseCount attribute), [1] (pubmed_client.DatabaseInfo attribute)

module pubmed_client

N

name (pubmed_client.DatabaseInfo attribute)

negate() (pubmed_client.SearchQuery method) non_zero() (pubmed_client.GlobalQueryResults method)

O

OaSubsetInfo (class in pubmed_client) or_() (pubmed_client.SearchQuery method)

orcid (pubmed_client.Author attribute) (pubmed_client.PmcAuthor attribute)

P

pages (pubmed_client.ArticleSummary attribute) (pubmed_client.PubMedArticle attribute) pmc (pubmed_client.Client attribute) pmc_id (pubmed_client.ArticleSummary attribute) (pubmed_client.PubMedArticle attribute) pmc_ids (pubmed_client.PmcLinks attribute) pmc_only() (pubmed_client.SearchQuery method) pmc_ref_count (pubmed_client.ArticleSummary attribute) PmcAffiliation (class in pubmed_client) PmcAuthor (class in pubmed_client) PmcClient (class in pubmed_client) PmcFullText (class in pubmed_client) pmcid (pubmed_client.OaSubsetInfo attribute) (pubmed_client.PmcFullText attribute) PmcLinks (class in pubmed_client) pmid (pubmed_client.ArticleSummary attribute) (pubmed_client.CitationMatch attribute), [1] (pubmed_client.PmcFullText attribute) (pubmed_client.PubMedArticle attribute) (pubmed_client.Reference attribute)

pub_date (pubmed_client.ArticleSummary attribute) (pubmed_client.PubMedArticle attribute) pub_types (pubmed_client.ArticleSummary attribute) published_after() (pubmed_client.SearchQuery method) published_before() (pubmed_client.SearchQuery method) published_between() (pubmed_client.SearchQuery method) published_in_year() (pubmed_client.SearchQuery method) pubmed (pubmed_client.Client attribute) pubmed_client module PubMedArticle (class in pubmed_client) PubMedClient (class in pubmed_client)

Q

query (pubmed_client.SpellCheckResult attribute), [1]

query() (pubmed_client.SearchQuery method) query_key (pubmed_client.EPostResult attribute), [1]

R

record_status (pubmed_client.ArticleSummary attribute) Reference (class in pubmed_client) references() (pubmed_client.PmcFullText method) related_pmids (pubmed_client.RelatedArticles attribute) RelatedArticles (class in pubmed_client)

replacements (pubmed_client.SpellCheckResult attribute), [1] results (pubmed_client.GlobalQueryResults attribute), [1] retracted (pubmed_client.OaSubsetInfo attribute) roles() (pubmed_client.Author method) (pubmed_client.PmcAuthor method)

S

search_and_fetch() (pubmed_client.PubMedClient method) search_and_fetch_summaries() (pubmed_client.PubMedClient method) search_articles() (pubmed_client.PubMedClient method) search_with_full_text() (pubmed_client.Client method) SearchQuery (class in pubmed_client) section_type (pubmed_client.ArticleSection attribute) sections() (pubmed_client.PmcFullText method) sort() (pubmed_client.SearchQuery method) sort_pub_date (pubmed_client.ArticleSummary attribute) source (pubmed_client.Reference attribute) source_pmids (pubmed_client.Citations attribute) (pubmed_client.PmcLinks attribute) (pubmed_client.RelatedArticles attribute)

spell_check() (pubmed_client.Client method) (pubmed_client.PubMedClient method) spell_check_db() (pubmed_client.PubMedClient method) SpellCheckResult (class in pubmed_client) status (pubmed_client.CitationMatch attribute), [1] (pubmed_client.DatabaseCount attribute), [1] suffix (pubmed_client.Author attribute) surname (pubmed_client.Author attribute) (pubmed_client.PmcAuthor attribute)

T

Table (class in pubmed_client) tables() (pubmed_client.PmcFullText method) term (pubmed_client.GlobalQueryResults attribute), [1] terms() (pubmed_client.SearchQuery method) title (pubmed_client.ArticleSection attribute) (pubmed_client.ArticleSummary attribute) (pubmed_client.PmcFullText attribute) (pubmed_client.PubMedArticle attribute) (pubmed_client.Reference attribute)

to_markdown() (pubmed_client.PmcFullText method)

U

updated (pubmed_client.OaSubsetInfo attribute)

V

volume (pubmed_client.ArticleSummary attribute) (pubmed_client.CitationMatch attribute), [1] (pubmed_client.CitationQuery attribute) (pubmed_client.PubMedArticle attribute)

W

webenv (pubmed_client.EPostResult attribute), [1] with_api_key() (pubmed_client.ClientConfig method) with_cache() (pubmed_client.ClientConfig method) with_config() (pubmed_client.Client static method) (pubmed_client.PmcClient static method) (pubmed_client.PubMedClient static method)

with_email() (pubmed_client.ClientConfig method) with_rate_limit() (pubmed_client.ClientConfig method) with_timeout_seconds() (pubmed_client.ClientConfig method) with_tool() (pubmed_client.ClientConfig method)

Y

year (pubmed_client.CitationMatch attribute), [1] (pubmed_client.CitationQuery attribute) (pubmed_client.Reference attribute)